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PBAL39_02597 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_02597" - Short-chain dehydrogenase in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_02597Short-chain dehydrogenase (134 aa)    
Predicted Functional Partners:
PBAL39_02602
Transcriptional regulator, AraC family protein (286 aa)
 
          0.720
PBAL39_19584
Putative short-chain dehydrogenase/reductase SDR (295 aa)
   
          0.713
PBAL39_02592
Short-chain dehydrogenase (269 aa)
 
       
0.694
PBAL39_22620
Short-chain dehydrogenase/reductase SDR (276 aa)
   
          0.658
PBAL39_16369
Short chain dehydrogenase (280 aa)
   
          0.651
PBAL39_19080
Short-chain dehydrogenase/reductase SDR (287 aa)
   
          0.635
PBAL39_15949
Putative short-chain dehydrogenase/oxidoreductase (279 aa)
   
          0.607
PBAL39_00762
Short chain dehydrogenase (279 aa)
   
          0.603
PBAL39_18734
Short-chain dehydrogenase/reductase SDR (285 aa)
   
          0.593
PBAL39_05393
Putative outer membrane protein (503 aa)
   
          0.485
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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