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PBAL39_02820 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_02820" - Putative HlyD-family transporter in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_02820Putative HlyD-family transporter (435 aa)    
Predicted Functional Partners:
PBAL39_02825
Putative hemolysin secretion transport system ATP-binding protein (733 aa)
 
          0.968
PBAL39_15344
ABC transporter ATP-binding protein (769 aa)
 
          0.844
PBAL39_02830
Response regulator (246 aa)
              0.792
PBAL39_02835
Two component sensor histidine kinase (620 aa)
              0.789
PBAL39_14869
Probable bacteriocin/lantibiotic ABC transporter, ATP-binding protein (743 aa)
 
          0.786
PBAL39_05578
Tricorn protease homolog ; Degrades oligopeptides (1073 aa)
   
          0.715
PBAL39_06626
Uncharacterized protein (149 aa)
   
          0.714
PBAL39_02142
Putative TonB-linked outer membrane protein (985 aa)
   
          0.628
PBAL39_12820
Sensor histidine kinase (528 aa)
   
          0.554
PBAL39_18479
Putative lipoprotein (442 aa)
   
          0.551
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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