STRINGSTRING
PBAL39_02935 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_02935" - Probable periplasmic binding protein possible mechanosensitive ion channel component in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_02935Probable periplasmic binding protein possible mechanosensitive ion channel component (767 aa)    
Predicted Functional Partners:
infB
Translation initiation factor IF-2 ; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (1013 aa)
       
      0.742
PBAL39_11522
tRNA-dihydrouridine synthase ; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines (335 aa)
       
      0.636
PBAL39_07675
Uncharacterized protein (612 aa)
   
          0.556
PBAL39_10446
Uncharacterized protein (386 aa)
   
          0.550
PBAL39_19205
Uncharacterized protein (171 aa)
   
          0.545
PBAL39_02930
Cyclic nucleotide binding-regulatory protein (192 aa)
              0.541
PBAL39_02925
3-beta hydroxysteroid dehydrogenase/isomerase (325 aa)
              0.541
PBAL39_17754
Outer membrane protein (449 aa)
   
 
      0.533
PBAL39_04448
Outer membrane protein (477 aa)
       
      0.505
PBAL39_03100
RND efflux system, outer membrane lipoprotein, NodT (477 aa)
       
      0.505
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (6%) [HD]