STRINGSTRING
PBAL39_03000 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_03000" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_03000Uncharacterized protein (537 aa)    
Predicted Functional Partners:
PBAL39_03005
Putative outer membrane protein (1034 aa)
 
          0.967
PBAL39_24243
Uncharacterized protein (198 aa)
   
          0.769
PBAL39_00275
Putative outer membrane protein (559 aa)
   
          0.750
PBAL39_00270
Putative TonB-linked outer membrane receptor protein (1103 aa)
   
          0.748
PBAL39_24505
Outer membrane protein Omp121 (1022 aa)
 
          0.747
PBAL39_23898
Putative outer membrane protein (1088 aa)
   
          0.747
PBAL39_18844
Putative outer membrane protein (1012 aa)
   
          0.743
PBAL39_18869
Putative outer membrane protein (589 aa)
   
          0.739
PBAL39_18854
Putative outer membrane protein (1018 aa)
   
          0.738
PBAL39_07370
Putative outer membrane protein (1101 aa)
   
          0.738
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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