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PBAL39_03080 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_03080" - Cyclic nucleotide binding regulatory protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_03080Cyclic nucleotide binding regulatory protein (218 aa)    
Predicted Functional Partners:
PBAL39_03070
Two-component response regulator (326 aa)
              0.859
PBAL39_16479
Cyclic nucleotide binding-regulatory protein (100 aa)
   
          0.664
PBAL39_10221
Uncharacterized protein (117 aa)
   
          0.591
PBAL39_10296
Universal stress protein (279 aa)
   
          0.572
PBAL39_20334
Putative outer membrane protein (582 aa)
   
          0.567
PBAL39_01217
Transcriptional regulator (258 aa)
   
          0.545
PBAL39_04059
Uncharacterized protein (157 aa)
   
          0.514
PBAL39_17564
CHU large protein candidate retaining b-glycosidase, glycoside hydrolase family 5 protein (1640 aa)
   
          0.512
PBAL39_02527
Lantibiotic dehydratase-like protein (928 aa)
   
          0.487
PBAL39_21100
Cyclic nucleotide binding regulatory protein (97 aa)
   
          0.482
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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