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STRINGSTRING
EDM34848.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM34848.1" - annotation not available in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM34848.1annotation not available (848 aa)    
Predicted Functional Partners:
EDM36888.1
annotation not available (442 aa)
 
          0.701
EDM36889.1
COG1629 Outer membrane receptor proteins, mostly Fe transport (1117 aa)
   
          0.654
EDM36498.1
Uncharacterized protein; COG0077 Prephenate dehydratase (502 aa)
   
          0.624
EDM36921.1
Uncharacterized protein; COG0457 FOG- TPR repeat (487 aa)
 
          0.606
EDM34506.1
Secreted protein containing N-terminal Zinc-dependent carboxypeptidase related domain, putative; COG2866 Predicted carboxypeptidase (816 aa)
   
          0.585
EDM35537.1
annotation not available (470 aa)
   
          0.584
EDM34902.1
annotation not available (477 aa)
   
          0.583
EDM37999.1
annotation not available (456 aa)
   
          0.580
EDM38907.1
annotation not available (497 aa)
 
          0.577
EDM34177.1
Probably involved in nutrient binding; COG4771 Outer membrane receptor for ferrienterochelin and colicins (1173 aa)
   
          0.569
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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