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PBAL39_03100 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_03100" - RND efflux system, outer membrane lipoprotein, NodT in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_03100RND efflux system, outer membrane lipoprotein, NodT (477 aa)    
Predicted Functional Partners:
PBAL39_03110
Multidrug resistance protein, AcrA/AcrE family (378 aa)
 
  0.997
PBAL39_03105
Multidrug resistance protein, AcrB/AcrD family (1064 aa)
  0.996
PBAL39_04438
Acridine efflux pump (360 aa)
 
  0.976
PBAL39_04443
Hydrophobe/amphiphile efflux-1 HAE1 (1055 aa)
  0.971
PBAL39_17759
Acriflavine resistance protein E (387 aa)
 
  0.967
PBAL39_17764
Acriflavin resistance protein D (1068 aa)
  0.960
PBAL39_03979
Putative HlyD family secretion protein (389 aa)
  0.903
PBAL39_08165
Membrane fusion efflux protein, putative (452 aa)
  0.876
PBAL39_04293
Multidrug efflux membrane fusion protein (1034 aa)
 
  0.866
PBAL39_16816
Membrane fusion protein possible cation efflux system protein (352 aa)
   
  0.863
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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