STRINGSTRING
PBAL39_03160 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_03160" - Oxidoreductase in Pedobacter sp. BAL39
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_03160Oxidoreductase (571 aa)    
Predicted Functional Partners:
PBAL39_01842
Aldehyde-alcohol dehydrogenase (876 aa)
   
 
  0.911
PBAL39_03839
Twin-arginine translocation pathway signal (219 aa)
 
     
  0.858
PBAL39_03165
Uncharacterized protein (112 aa)
              0.845
PBAL39_14494
Transketolase (809 aa)
     
 
    0.840
PBAL39_04788
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion (658 aa)
     
 
    0.840
PBAL39_01457
Twin-arginine translocation pathway signal (191 aa)
   
          0.778
PBAL39_14909
Uncharacterized protein (259 aa)
 
          0.752
PBAL39_24390
NAD+-dependent aldehyde dehydrogenase (512 aa)
   
 
  0.749
PBAL39_17539
Succinate-semialdehyde dehydrogenase (457 aa)
   
 
  0.749
PBAL39_08240
Delta-1-pyrroline-5-carboxylate dehydrogenase (544 aa)
   
 
  0.749
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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