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PBAL39_03180 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_03180" - Transcriptional Regulator, DeoR family protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_03180Transcriptional Regulator, DeoR family protein (249 aa)    
Predicted Functional Partners:
PBAL39_03175
5’(3’)-deoxyribonucleotidase (183 aa)
              0.613
PBAL39_22130
Putative LacI-family transcriptional regulator, ribose operon repressor (334 aa)
   
     
  0.594
PBAL39_17489
Transcriptional regulator (337 aa)
   
     
  0.587
PBAL39_19394
PurR (344 aa)
   
     
  0.566
PBAL39_20970
Uncharacterized protein (636 aa)
 
 
      0.535
PBAL39_03140
Transcriptional regulator, LacI family protein (345 aa)
   
     
  0.531
PBAL39_14809
LacI family transcriptional regulator (341 aa)
   
     
  0.518
PBAL39_07250
Carbohydrate kinase, FGGY (451 aa)
 
     
  0.510
PBAL39_08636
Putative LacI-family transcriptional regulator (336 aa)
   
     
  0.486
PBAL39_22635
LacI family transcriptional regulator (340 aa)
   
     
  0.484
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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