STRINGSTRING
PBAL39_03334 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_03334" - Ferrichrome iron receptor in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_03334Ferrichrome iron receptor (778 aa)    
Predicted Functional Partners:
PBAL39_03329
Cytoplasmic membrane protein (363 aa)
 
        0.977
PBAL39_13994
Uncharacterized protein (371 aa)
 
        0.809
PBAL39_23397
Membrane protein (460 aa)
 
        0.736
PBAL39_00305
Uncharacterized protein (393 aa)
 
        0.723
PBAL39_18174
Permease protein of ABC transporter (348 aa)
 
 
  0.685
PBAL39_07785
Uncharacterized protein (448 aa)
 
        0.684
PBAL39_05783
Biopolymer transport protein (275 aa)
 
 
  0.670
PBAL39_21170
TonB-dependent outer membrane receptor, putative (667 aa)
   
          0.661
PBAL39_16651
Uncharacterized protein (449 aa)
 
        0.656
PBAL39_24183
Putative outer membrane protein (524 aa)
   
          0.647
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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