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PBAL39_03389 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_03389" - Carboxy-terminal processing protease in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_03389Carboxy-terminal processing protease (525 aa)    
Predicted Functional Partners:
PBAL39_03399
Thioredoxin family protein (101 aa)
              0.703
PBAL39_03394
Uncharacterized protein (277 aa)
              0.703
PBAL39_03384
Thioredoxin family protein (625 aa)
              0.684
PBAL39_03379
Uncharacterized protein (450 aa)
              0.684
PBAL39_03374
Putative outer membrane protein (1173 aa)
              0.623
PBAL39_25380
Membrane protein (444 aa)
 
 
  0.550
PBAL39_08871
Peptidylprolyl isomerase (454 aa)
 
   
  0.514
PBAL39_14749
Probable serine protease DO-like protein (569 aa)
 
   
  0.510
PBAL39_10091
Serine protease (512 aa)
   
   
  0.500
rnr
Ribonuclease R ; 3’-5’ exoribonuclease that releases 5’-nucleoside monophosphates and is involved in maturation of structured RNAs (709 aa)
 
          0.498
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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