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PBAL39_03409 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_03409" - Outer membrane vitamin B12 receptor protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_03409Outer membrane vitamin B12 receptor protein (670 aa)    
Predicted Functional Partners:
PBAL39_03414
Uncharacterized protein (378 aa)
 
          0.950
PBAL39_03419
Potassium-transporting ATPase subunit A (129 aa)
 
          0.871
PBAL39_01247
Putative cell surface protein (366 aa)
 
          0.855
PBAL39_01242
Uncharacterized protein (371 aa)
 
          0.847
PBAL39_24293
TonB-dependent receptor domain protein (617 aa)
   
          0.727
PBAL39_06451
Universal stress protein (285 aa)
   
          0.609
PBAL39_23862
Uncharacterized protein (53 aa)
   
          0.601
PBAL39_15024
TonB-dependent receptor (1149 aa)
   
          0.571
PBAL39_09751
Uncharacterized protein (176 aa)
   
          0.564
PBAL39_24273
Putative transcriptional regulator GerE, LuxR family protein (254 aa)
   
          0.535
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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