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PBAL39_03464 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_03464" - TonB-dependent receptor plug domain protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_03464TonB-dependent receptor plug domain protein (1056 aa)    
Predicted Functional Partners:
PBAL39_03459
Uncharacterized protein (477 aa)
              0.818
PBAL39_03454
Uncharacterized protein (235 aa)
              0.792
PBAL39_16776
Putative outer membrane protein (516 aa)
   
          0.766
PBAL39_20189
Uncharacterized protein (470 aa)
   
          0.760
PBAL39_20274
Uncharacterized protein (462 aa)
   
          0.673
PBAL39_21210
Uncharacterized protein (469 aa)
   
          0.660
PBAL39_22897
Uncharacterized protein (462 aa)
   
          0.657
PBAL39_18959
Putative outer membrane protein (522 aa)
   
          0.652
PBAL39_15104
Putative outer membrane protein (453 aa)
   
          0.636
PBAL39_06656
Uncharacterized protein (459 aa)
   
          0.619
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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