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EDM35578.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM35578.1" - COG5651 PPE-repeat proteins in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM35578.1COG5651 PPE-repeat proteins (553 aa)    
Predicted Functional Partners:
EDM35580.1
annotation not available (513 aa)
 
          0.962
EDM35581.1
Probably involved in nutrient binding; COG4771 Outer membrane receptor for ferrienterochelin and colicins (1028 aa)
 
        0.961
EDM35577.1
COG1524 Uncharacterized proteins of the AP superfamily (571 aa)
 
          0.936
EDM36289.1
COG5651 PPE-repeat proteins (7799 aa)
     
  0.888
EDM35585.1
Putative outer membrane protein; Probably involved in nutrient binding (468 aa)
 
          0.875
EDM35579.1
annotation not available (245 aa)
              0.855
EDM35576.1
annotation not available (443 aa)
 
 
      0.846
EDM35586.1
Probably involved in nutrient binding; COG1629 Outer membrane receptor proteins, mostly Fe transport (986 aa)
 
          0.834
EDM36641.1
COG3210 Large exoproteins involved in heme utilization or adhesion (1729 aa)
     
  0.827
EDM35584.1
COG2335 Secreted and surface protein containing fasciclin-like repeats (694 aa)
 
          0.793
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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