STRINGSTRING
PBAL39_03554 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_03554" - Putative outer membrane protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_03554Putative outer membrane protein (986 aa)    
Predicted Functional Partners:
PBAL39_03549
Putative outer membrane protein (468 aa)
 
          0.902
PBAL39_03524
Uncharacterized protein (513 aa)
 
          0.851
PBAL39_03514
Uncharacterized protein (553 aa)
 
          0.846
PBAL39_03509
Uncharacterized protein (571 aa)
 
          0.838
PBAL39_05853
Putative outer membrane protein (513 aa)
 
          0.797
PBAL39_05833
Uncharacterized protein (461 aa)
   
          0.778
PBAL39_07620
Putative outer membrane protein (1126 aa)
   
          0.772
PBAL39_07615
Uncharacterized protein (470 aa)
   
          0.767
PBAL39_05848
Putative ATP/GTP-binding protein (367 aa)
 
          0.748
PBAL39_00717
Uncharacterized protein (478 aa)
   
          0.748
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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