STRINGSTRING
EDM35605.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM35605.1" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM35605.1Uncharacterized protein; COG0419 ATPase involved in DNA repair (188 aa)    
Predicted Functional Partners:
EDM35607.1
dTDP-glucose 4,6-dehydratase, NAD-dependent epimerase/dehydratase-related protein; COG0451 Nucleoside-diphosphate-sugar epimerases (329 aa)
              0.881
EDM35606.1
COG1087 UDP-glucose 4-epimerase (340 aa)
              0.881
EDM35608.1
COG1004 Predicted UDP-glucose 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family (418 aa)
              0.851
EDM34068.1
annotation not available (121 aa)
   
          0.709
EDM35437.1
annotation not available (213 aa)
   
          0.696
EDM38385.1
TPR domain protein; COG0457 FOG- TPR repeat (382 aa)
   
          0.653
EDM38256.1
annotation not available (65 aa)
   
          0.643
EDM35750.1
annotation not available (571 aa)
   
          0.635
EDM35604.1
COG1088 dTDP-D-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily (350 aa)
              0.632
EDM36019.1
annotation not available (311 aa)
   
          0.629
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
Server load: low (12%) [HD]