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STRINGSTRING
EDM35623.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM35623.1" - annotation not available in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM35623.1annotation not available (816 aa)    
Predicted Functional Partners:
EDM38168.1
Uncharacterized protein; COG1305 Transglutaminase-like enzymes, putative cysteine proteases (659 aa)
   
          0.723
EDM38167.1
Uncharacterized protein; COG1305 Transglutaminase-like enzymes, putative cysteine proteases (635 aa)
   
          0.700
EDM35620.1
annotation not available (139 aa)
 
          0.697
EDM36588.1
Uncharacterized protein; COG1305 Transglutaminase-like enzymes, putative cysteine proteases (667 aa)
   
          0.684
EDM36587.1
Uncharacterized protein; COG1305 Transglutaminase-like enzymes, putative cysteine proteases (638 aa)
   
          0.664
EDM35276.1
Putative transmembrane glycosyltransferase; COG1215 Glycosyltransferases, probably involved in cell wall biogenesis (360 aa)
   
          0.648
EDM37389.1
Uncharacterized protein; COG1312 D-mannonate dehydratase (100 aa)
   
          0.615
EDM36542.1
annotation not available (339 aa)
   
          0.611
EDM36289.1
COG5651 PPE-repeat proteins (7799 aa)
       
  0.610
EDM37490.1
COG5651 PPE-repeat proteins (931 aa)
   
          0.604
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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