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PBAL39_03764 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_03764" - UPF0176 protein PBAL39_03764 in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_03764UPF0176 protein PBAL39_03764 (312 aa)    
Predicted Functional Partners:
PBAL39_03769
Uncharacterized protein (964 aa)
              0.803
PBAL39_10960
O-methyltransferase (211 aa)
            0.740
PBAL39_03759
Aminopeptidase C (Bleomycin hydrolase) (393 aa)
              0.574
pnp
Polynucleotide phosphorylase ; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3’- to 5’-direction (715 aa)
   
        0.573
PBAL39_03774
Putative outer membrane protein (1000 aa)
              0.440
PBAL39_03232
tRNA pseudouridine synthase C (235 aa)
 
 
        0.426
PBAL39_10556
Putative A/G-specific adenine glycosylase (350 aa)
   
      0.408
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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