STRINGSTRING
PBAL39_03769 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_03769" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_03769Uncharacterized protein (964 aa)    
Predicted Functional Partners:
PBAL39_03784
Uncharacterized protein (453 aa)
 
          0.808
PBAL39_03764
UPF0176 protein PBAL39_03764 (312 aa)
              0.803
PBAL39_03779
Uncharacterized protein (474 aa)
 
          0.786
PBAL39_03774
Putative outer membrane protein (1000 aa)
 
          0.746
PBAL39_25425
Membrane spanning protein, required for outer membrane integrity (526 aa)
   
          0.679
PBAL39_05403
Two-component system sensor histidine kinase/response regulator, hybrid (’one-component system’) (1363 aa)
   
          0.674
PBAL39_06201
Uncharacterized protein (1005 aa)
   
          0.663
PBAL39_10176
Uncharacterized protein (430 aa)
   
          0.654
PBAL39_04264
Uncharacterized protein (142 aa)
   
          0.653
PBAL39_25415
Outer membrane assembly protein (422 aa)
   
          0.646
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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