STRINGSTRING
PBAL39_03784 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_03784" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_03784Uncharacterized protein (453 aa)    
Predicted Functional Partners:
PBAL39_03799
Beta-glucosidase (773 aa)
          0.875
PBAL39_03779
Uncharacterized protein (474 aa)
 
          0.873
PBAL39_03789
Possible xylosidase/arabinosidase (565 aa)
 
          0.861
PBAL39_03804
Uncharacterized protein (263 aa)
 
          0.828
PBAL39_03769
Uncharacterized protein (964 aa)
 
          0.808
PBAL39_20389
Beta-glucosidase (775 aa)
          0.713
PBAL39_03794
Uncharacterized protein (207 aa)
 
          0.643
PBAL39_03774
Putative outer membrane protein (1000 aa)
 
          0.630
PBAL39_13305
Uncharacterized protein (969 aa)
 
          0.625
PBAL39_10940
Putative gliding motility protein (159 aa)
   
          0.531
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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