STRINGSTRING
PBAL39_03789 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_03789" - Possible xylosidase/arabinosidase in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_03789Possible xylosidase/arabinosidase (565 aa)    
Predicted Functional Partners:
PBAL39_03784
Uncharacterized protein (453 aa)
 
          0.861
PBAL39_03799
Beta-glucosidase (773 aa)
              0.689
PBAL39_03794
Uncharacterized protein (207 aa)
              0.684
PBAL39_03779
Uncharacterized protein (474 aa)
 
          0.634
PBAL39_23537
Uncharacterized protein (1746 aa)
   
          0.633
PBAL39_02645
Uncharacterized protein (279 aa)
   
          0.593
PBAL39_23542
Outer membrane protein (763 aa)
   
          0.590
PBAL39_20455
Putative lipoprotein (498 aa)
   
          0.580
PBAL39_10746
Uncharacterized protein (396 aa)
   
          0.577
PBAL39_03804
Uncharacterized protein (263 aa)
 
          0.540
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (7%) [HD]