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PBAL39_03819 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_03819" - Putative RNA polymerase ECF-type sigma factor in Pedobacter sp. BAL39
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_03819Putative RNA polymerase ECF-type sigma factor (190 aa)    
Predicted Functional Partners:
PBAL39_03824
Putative anti-sigma factor (357 aa)
 
          0.844
PBAL39_03814
NAD-dependent epimerase/dehydratase-dTDP-4-dehydrorhamnose reductase (316 aa)
              0.640
PBAL39_07695
Putative anti-sigma factor (392 aa)
   
          0.637
PBAL39_17254
Putative anti-sigma factor (346 aa)
   
          0.636
PBAL39_13160
Putative anti sigma factor (355 aa)
   
          0.619
PBAL39_06056
Putative anti-sigma factor (341 aa)
   
          0.617
PBAL39_22110
Putative anti-sigma factor (322 aa)
   
          0.600
PBAL39_03364
Putative ECF-type RNA polymerase sigma factor (196 aa)
   
          0.592
PBAL39_07880
RNA polymerase ECF-type sigma factor (183 aa)
   
          0.580
PBAL39_16786
Putative anti-sigma factor (338 aa)
   
          0.573
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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