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PBAL39_03829 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_03829" - TonB-dependent receptor in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_03829TonB-dependent receptor (974 aa)    
Predicted Functional Partners:
PBAL39_03824
Putative anti-sigma factor (357 aa)
 
          0.677
PBAL39_03834
Twin-arginine translocation pathway signal (311 aa)
              0.636
PBAL39_09021
Uncharacterized protein (469 aa)
   
          0.567
PBAL39_07080
Uncharacterized protein (452 aa)
   
          0.560
PBAL39_07475
Uncharacterized protein (600 aa)
   
          0.446
PBAL39_09026
TonB-dependent receptor (1092 aa)
   
          0.445
PBAL39_03839
Twin-arginine translocation pathway signal (219 aa)
              0.434
PBAL39_22700
Fucose permease (474 aa)
 
          0.421
PBAL39_03844
Glucose-methanol-choline oxidoreductase (567 aa)
              0.406
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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