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PBAL39_03979 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_03979" - Putative HlyD family secretion protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_03979Putative HlyD family secretion protein (389 aa)    
Predicted Functional Partners:
PBAL39_03984
Putative ABC transporter ATP-binding protein (249 aa)
  0.998
PBAL39_03989
ABC transporter, permease protein (406 aa)
  0.995
PBAL39_03974
Outer membrane efflux protein (444 aa)
 
  0.991
PBAL39_18334
ABC transporter related protein (252 aa)
  0.987
PBAL39_03639
ABC transporter efflux protein (410 aa)
  0.975
PBAL39_18304
ABC transporter efflux protein (391 aa)
 
  0.975
PBAL39_01807
Putative permease component of ABC transporter (412 aa)
 
  0.973
PBAL39_08170
Putative outer membrane transport/efflux protein (457 aa)
 
  0.914
PBAL39_20750
ABC transporter, ATP-binding protein (232 aa)
  0.914
PBAL39_20730
ABC transporter, ATPase subunit (229 aa)
  0.913
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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