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PBAL39_04024 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_04024" - Response regulator in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_04024Response regulator (135 aa)    
Predicted Functional Partners:
PBAL39_18244
Histidine kinase sensor protein (785 aa)
 
          0.643
PBAL39_11827
Putative repetitive protein with two-component sensor and regulator motifs (131 aa)
   
          0.609
PBAL39_17499
Histidine kinase sensor protein (350 aa)
 
          0.584
PBAL39_14669
Sensory box histidine kinase/response regulator (456 aa)
   
          0.579
PBAL39_04019
YCE I like family protein (197 aa)
              0.536
PBAL39_23582
Sensor protein fixL (394 aa)
   
          0.500
rplO
50S ribosomal protein L15 ; Binds to the 23S rRNA (148 aa)
   
          0.420
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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