STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM35685.1Hypothetical protein; COG0517 FOG: CBS domain. (142 aa)    
Predicted Functional Partners:
guaA
Bifunctional GMP synthase/glutamine amidotransferase protein; Catalyzes the synthesis of GMP from XMP.
    
 0.769
guaB
IMP dehydrogenase/GMP reductase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 0.727
EDM38367.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
    
 0.726
EDM38368.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
    
 0.726
EDM38369.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
    
 0.726
EDM37808.1
MCP methyltransferase, CheR-type; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
    
  0.672
EDM35684.1
Auxin-regulated protein.
       0.664
EDM33940.1
Sensor histidine kinase/response regulator fusion protein; COG0642 Signal transduction histidine kinase.
     
 0.664
EDM35683.1
ABC transporter, ATP-binding protein; COG1137 ABC-type (unclassified) transport system, ATPase component.
  
    0.634
EDM35876.1
COG2176 DNA polymerase III, alpha subunit (gram-positive type).
  
 
  0.552
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39
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