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PBAL39_04064 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_04064" - Transcriptional regulator, DeoR family protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_04064Transcriptional regulator, DeoR family protein (215 aa)    
Predicted Functional Partners:
PBAL39_04059
Uncharacterized protein (157 aa)
          0.933
PBAL39_04069
Uncharacterized protein (41 aa)
              0.659
PBAL39_06311
Uncharacterized protein (358 aa)
 
          0.550
PBAL39_04054
Endothelin-converting enzyme 1 (668 aa)
              0.523
PBAL39_12257
Uncharacterized protein (251 aa)
 
          0.493
PBAL39_04074
Uncharacterized protein (376 aa)
              0.470
PBAL39_01512
Amino acid adenylation (1329 aa)
   
          0.447
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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