STRINGSTRING
PBAL39_04104 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_04104" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_04104Uncharacterized protein (298 aa)    
Predicted Functional Partners:
PBAL39_04099
NAD(P)H dehydrogenase (Quinone) (204 aa)
 
          0.774
PBAL39_11030
Putative transcriptional regulator (299 aa)
   
          0.716
PBAL39_07375
Putative outer membrane protein (525 aa)
   
          0.657
PBAL39_17096
Uncharacterized protein (723 aa)
   
          0.653
PBAL39_19484
Uncharacterized protein (694 aa)
   
          0.646
PBAL39_04109
Two-component system response regulator (232 aa)
 
          0.604
PBAL39_07675
Uncharacterized protein (612 aa)
   
          0.588
PBAL39_18809
Ferrichrome-iron receptor (904 aa)
   
          0.571
PBAL39_04114
Two-component system sensor histidine kinase (445 aa)
 
          0.571
PBAL39_22942
Alpha-galactosidase (684 aa)
   
          0.529
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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