STRINGSTRING
PBAL39_04244 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_04244" - 4-enzyme protein: 3-hydroxyacyl-CoA dehydrogenase 3-hydroxybutyryl-CoA epimerase in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_042444-enzyme protein- 3-hydroxyacyl-CoA dehydrogenase 3-hydroxybutyryl-CoA epimerase (801 aa)    
Predicted Functional Partners:
PBAL39_04239
Acetyl-CoA acetyltransferase (392 aa)
 
  0.999
PBAL39_04234
Acyl-CoA dehydrogenase (596 aa)
 
 
  0.993
PBAL39_19180
Acetyl-CoA acetyltransferase (391 aa)
 
  0.986
PBAL39_11862
Enoyl-CoA hydratase (260 aa)
  0.943
PBAL39_04249
Transcriptional regulator, MarR family protein (151 aa)
 
          0.911
PBAL39_10506
Bytyryl-CoA dehydrogenase (Short-chain-acyl-CoA dehydrogenase) (379 aa)
 
 
  0.878
PBAL39_17449
Acyl-CoA dehydrogenase (396 aa)
 
 
  0.870
PBAL39_14624
Uncharacterized protein (155 aa)
   
  0.869
PBAL39_19255
Succinyl-CoA transferase, beta subunit (219 aa)
   
 
  0.865
PBAL39_06981
Acyl-CoA dehydrogenase (393 aa)
 
 
  0.864
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (9%) [HD]