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PBAL39_04249 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_04249" - Transcriptional regulator, MarR family protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_04249Transcriptional regulator, MarR family protein (151 aa)    
Predicted Functional Partners:
PBAL39_04244
4-enzyme protein- 3-hydroxyacyl-CoA dehydrogenase 3-hydroxybutyryl-CoA epimerase (801 aa)
 
          0.911
PBAL39_04239
Acetyl-CoA acetyltransferase (392 aa)
              0.848
PBAL39_04234
Acyl-CoA dehydrogenase (596 aa)
              0.825
PBAL39_07950
Uncharacterized protein (90 aa)
   
          0.588
PBAL39_02297
Uncharacterized protein (134 aa)
   
          0.584
PBAL39_04254
Outer membrane protein, OmpA/MotB family (439 aa)
              0.554
PBAL39_04229
Peptidyl-prolyl cis-trans isomerase (163 aa)
              0.500
PBAL39_13747
Uncharacterized protein (155 aa)
   
          0.496
PBAL39_04224
Peptidyl-prolyl cis-trans isomerase (306 aa)
              0.491
PBAL39_10311
Uncharacterized protein (217 aa)
   
          0.490
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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