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STRINGSTRING
EDM35728.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM35728.1" - annotation not available in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM35728.1annotation not available (142 aa)    
Predicted Functional Partners:
EDM36715.1
Possible membrane protein possible peptidase, M23/M37 family; COG0419 ATPase involved in DNA repair (126 aa)
   
      0.588
EDM35495.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide (739 aa)
       
  0.587
EDM37431.1
Formiminoglutamase-related protein; COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; Belongs to the arginase family (393 aa)
   
          0.586
EDM34274.1
Aminodeoxychorismate lyase (4-amino-4-deoxychorismate lyase); COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase (176 aa)
   
          0.573
EDM36289.1
COG5651 PPE-repeat proteins (7799 aa)
   
   
  0.545
EDM35753.1
annotation not available (271 aa)
   
 
      0.527
EDM34455.1
Putative hemin receptor; COG2067 Long-chain fatty acid transport protein (496 aa)
   
          0.515
EDM34062.1
annotation not available (171 aa)
   
          0.515
EDM38194.1
Uncharacterized protein; COG0823 Periplasmic component of the Tol biopolymer transport system (1046 aa)
 
 
 
  0.507
EDM36325.1
TM2 domain family protein; COG2314 Predicted membrane protein (119 aa)
   
          0.497
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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