STRINGSTRING
PBAL39_04298 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_04298" - Outer membrane efflux protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_04298Outer membrane efflux protein (440 aa)    
Predicted Functional Partners:
PBAL39_04288
Cation or acridine efflux membrane fusion protein (358 aa)
 
          0.972
PBAL39_04293
Multidrug efflux membrane fusion protein (1034 aa)
 
          0.955
PBAL39_04303
Uncharacterized protein (270 aa)
              0.669
PBAL39_10246
Uncharacterized protein (141 aa)
   
          0.607
PBAL39_19000
Uncharacterized protein (129 aa)
   
          0.558
PBAL39_12398
Putative outer membrane protein (1038 aa)
   
          0.528
PBAL39_15099
Putative outer membrane protein (1105 aa)
   
          0.527
PBAL39_04283
Peptidase M61 (581 aa)
              0.515
PBAL39_07750
Outer membrane receptor ragA protein (1020 aa)
   
          0.494
PBAL39_18970
Putative outer membrane protein (970 aa)
   
          0.477
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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