• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
EDM36993.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM36993.1" - annotation not available in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM36993.1annotation not available (1168 aa)    
Predicted Functional Partners:
EDM36996.1
CHU large protein uncharacterized; COG2931 RTX toxins and related Ca2+-binding proteins (3896 aa)
 
   
  0.916
EDM36289.1
COG5651 PPE-repeat proteins (7799 aa)
       
  0.888
EDM35542.1
Transcriptional regulator, Crp/Fnr family protein; COG2133 Glucose/sorbosone dehydrogenases (891 aa)
 
   
  0.878
EDM36641.1
COG3210 Large exoproteins involved in heme utilization or adhesion (1729 aa)
       
  0.876
EDM36995.1
annotation not available (350 aa)
 
          0.824
EDM34613.1
COG2911 Uncharacterized protein conserved in bacteria (1473 aa)
   
 
  0.774
EDM36994.1
COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins; Belongs to the ompA family (657 aa)
 
     
  0.767
EDM37446.1
PKD; COG3291 FOG- PKD repeat (1990 aa)
   
   
    0.765
EDM37447.1
annotation not available (309 aa)
 
          0.742
EDM34869.1
annotation not available (266 aa)
   
          0.728
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
Server load: low (9%) [HD]