STRINGSTRING
PBAL39_04413 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_04413" - Putative outer membrane protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_04413Putative outer membrane protein (596 aa)    
Predicted Functional Partners:
PBAL39_04418
Uncharacterized protein (1071 aa)
 
          0.965
PBAL39_04408
Uncharacterized protein (306 aa)
 
          0.876
PBAL39_04423
Uncharacterized protein (208 aa)
 
          0.873
PBAL39_05148
Uncharacterized protein (1078 aa)
 
          0.848
PBAL39_04403
Protein containing hemopexin repeats (415 aa)
 
          0.810
PBAL39_14159
Uncharacterized protein (511 aa)
   
          0.751
PBAL39_12728
Putative TonB dependent receptor outer membrane protein (1061 aa)
   
          0.748
PBAL39_00270
Putative TonB-linked outer membrane receptor protein (1103 aa)
   
          0.748
PBAL39_05118
Putative outer membrane protein (1070 aa)
   
          0.745
PBAL39_10815
Putative outer membrane protein (1080 aa)
   
          0.743
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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