STRINGSTRING
PBAL39_04423 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_04423" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_04423Uncharacterized protein (208 aa)    
Predicted Functional Partners:
PBAL39_04418
Uncharacterized protein (1071 aa)
 
          0.894
PBAL39_04413
Putative outer membrane protein (596 aa)
 
          0.873
PBAL39_04408
Uncharacterized protein (306 aa)
 
          0.838
PBAL39_04403
Protein containing hemopexin repeats (415 aa)
 
          0.828
PBAL39_04548
TraM-like protein (308 aa)
   
          0.746
PBAL39_03227
Uncharacterized protein (153 aa)
   
          0.745
PBAL39_14829
Uncharacterized protein (359 aa)
   
          0.712
PBAL39_04583
Conjugative transposon protein TraI (220 aa)
   
          0.707
PBAL39_14159
Uncharacterized protein (511 aa)
   
          0.671
PBAL39_15474
Uncharacterized protein (261 aa)
   
          0.670
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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