STRINGSTRING
PBAL39_04598 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_04598" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_04598Uncharacterized protein (717 aa)    
Predicted Functional Partners:
PBAL39_04603
Putative regulatory protein (301 aa)
              0.859
PBAL39_00642
Uncharacterized protein (376 aa)
   
          0.646
PBAL39_24775
Bacterial Ig-like domain protein (1193 aa)
   
          0.636
PBAL39_04593
Conserved protein found in conjugate transposon (514 aa)
              0.621
PBAL39_04588
Uncharacterized protein (126 aa)
              0.571
PBAL39_00637
Putative outer membrane protein (550 aa)
   
          0.558
PBAL39_09416
Putative outer membrane protein (546 aa)
   
          0.483
PBAL39_09426
Putative alpha-1,6-mannanase (386 aa)
   
          0.476
PBAL39_16631
Putative outer membrane protein (1180 aa)
   
          0.468
PBAL39_04583
Conjugative transposon protein TraI (220 aa)
              0.461
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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