STRINGSTRING
der protein (Pedobacter sp. BAL39) - STRING interaction network
"der" - GTP-binding protein EngA in Pedobacter sp. BAL39
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
derGTP-binding protein EngA ; GTPase that plays an essential role in the late steps of ribosome biogenesis (433 aa)    
Predicted Functional Partners:
rplN
50S ribosomal protein L14 ; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome (122 aa)
       
 
  0.941
rplA
50S ribosomal protein L1 ; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release (232 aa)
   
 
  0.941
rplF
50S ribosomal protein L6 ; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center (185 aa)
   
 
  0.903
cmk
Cytidine monophosphate kinase (225 aa)
   
  0.889
PBAL39_04628
GTPase Era ; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism (292 aa)
 
   
0.865
PBAL39_08821
Pseudouridine synthase (463 aa)
 
   
  0.825
plsY
Lysophosphatidic acid synthase ; Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP (215 aa)
            0.812
rplX
50S ribosomal protein L24 ; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit (112 aa)
   
 
  0.797
rplD
50S ribosomal protein L4 ; Forms part of the polypeptide exit tunnel (209 aa)
   
 
  0.797
gidB
16S rRNA 7-methylguanosine methyltransferase ; Specifically methylates the N7 position of a guanine in 16S rRNA (210 aa)
 
   
  0.784
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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