STRINGSTRING
PBAL39_04638 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_04638" - Carboxy-terminal processing protease in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_04638Carboxy-terminal processing protease (528 aa)    
Predicted Functional Partners:
PBAL39_04648
Uncharacterized protein (189 aa)
              0.653
murQ
N-acetylmuramic acid 6-phosphate lyase ; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate (307 aa)
              0.650
PBAL39_08871
Peptidylprolyl isomerase (454 aa)
 
   
  0.572
PBAL39_06781
Uncharacterized protein (578 aa)
 
 
  0.558
PBAL39_04653
Membrane protein (250 aa)
              0.530
rnr
Ribonuclease R ; 3’-5’ exoribonuclease that releases 5’-nucleoside monophosphates and is involved in maturation of structured RNAs (709 aa)
 
          0.528
PBAL39_10021
1-acyl-sn-glycerol-3-phosphate acetyltransferase, putative (244 aa)
 
        0.511
PBAL39_14749
Probable serine protease DO-like protein (569 aa)
 
   
  0.508
PBAL39_10091
Serine protease (512 aa)
   
   
  0.500
PBAL39_01017
Putative exported N-acetylmuramoyl-L-alanine amidase (300 aa)
   
          0.500
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (7%) [HD]