STRINGSTRING
PBAL39_04888 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_04888" - 2-nitropropane dioxygenase in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_048882-nitropropane dioxygenase (314 aa)    
Predicted Functional Partners:
lpxC
UDP-3-O-[R-3-hydroxymyristoyl]-N-acetylglucosamine deacetylase ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis (469 aa)
 
 
  0.924
PBAL39_25195
3-hydroxymyristoyl/3-hydroxydecanoyl-(Acyl carrier protein) dehydratase (148 aa)
 
 
  0.916
PBAL39_12137
3-oxoacyl-[acyl-carrier-protein] synthase 2 ; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP (417 aa)
 
 
  0.915
PBAL39_04893
Amidohydrolase 1 (392 aa)
   
        0.865
lipB
Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase ; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate (231 aa)
         
  0.828
PBAL39_17579
3-oxoacyl-[acyl-carrier-protein] synthase 2 ; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP (408 aa)
 
 
  0.798
PBAL39_04883
Acylphosphatase (90 aa)
              0.788
PBAL39_24450
Malonyl CoA-acyl carrier protein transacylase (293 aa)
 
   
  0.770
fabV
Enoyl-[acyl-carrier-protein] reductase [NADH] ; Involved in the final reduction of the elongation cycle of fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon-carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP) (396 aa)
         
  0.758
PBAL39_25190
3-oxoacyl-[acyl-carrier-protein] synthase (425 aa)
 
 
  0.750
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (8%) [HD]