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PBAL39_04898 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_04898" - Pseudouridine synthase in Pedobacter sp. BAL39
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_04898Pseudouridine synthase (329 aa)    
Predicted Functional Partners:
rlmN
tRNA m2A37 methyltransferase ; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs (349 aa)
   
      0.790
PBAL39_03232
tRNA pseudouridine synthase C (235 aa)
 
  0.781
PBAL39_12433
Pseudouridine synthase ; Responsible for synthesis of pseudouridine from uracil (343 aa)
 
  0.707
PBAL39_18099
Pseudouridylate synthase (240 aa)
   
  0.628
PBAL39_13847
Putative methyltransferase (174 aa)
   
        0.597
PBAL39_19459
Uncharacterized protein (245 aa)
   
  0.597
PBAL39_08010
Ribosomal large subunit pseudouridine synthase D (228 aa)
   
  0.596
PBAL39_04893
Amidohydrolase 1 (392 aa)
              0.570
PBAL39_04888
2-nitropropane dioxygenase (314 aa)
              0.570
der
GTP-binding protein EngA ; GTPase that plays an essential role in the late steps of ribosome biogenesis (433 aa)
 
   
  0.553
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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