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PBAL39_04933 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_04933" - Transcription-repair coupling factor in Pedobacter sp. BAL39
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
PBAL39_04933Transcription-repair coupling factor (137 aa)    
Predicted Functional Partners:
dxs
1-deoxyxylulose-5-phosphate synthase ; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) (642 aa)
              0.779
PBAL39_01457
Twin-arginine translocation pathway signal (191 aa)
   
          0.757
PBAL39_03844
Glucose-methanol-choline oxidoreductase (567 aa)
   
          0.712
PBAL39_01462
Oxidoreductase (565 aa)
   
          0.712
PBAL39_03160
Oxidoreductase (571 aa)
   
          0.707
PBAL39_03839
Twin-arginine translocation pathway signal (219 aa)
   
          0.705
PBAL39_14909
Uncharacterized protein (259 aa)
   
          0.667
PBAL39_01847
Uncharacterized protein (353 aa)
   
          0.597
PBAL39_03864
Putative dehydrogenase (481 aa)
   
          0.591
glyA
Serine hydroxymethyltransferase ; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism (423 aa)
              0.584
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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