STRINGSTRING
PBAL39_04948 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_04948" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_04948Uncharacterized protein (785 aa)    
Predicted Functional Partners:
PBAL39_18344
1-acyl-sn-glycerol-3-phosphate acyltransferase (244 aa)
 
 
  0.619
PBAL39_12302
Putative glycerophosphodiester phosphodiesterase (331 aa)
 
 
    0.583
PBAL39_17669
Putative transmembrane PAP2-family protein (178 aa)
   
  0.571
PBAL39_24905
AMP-binding enzyme, putative (637 aa)
   
 
    0.569
PBAL39_04259
Long-chain-fatty-acid--CoA ligase (Acyl-CoA synthetase) (590 aa)
   
 
    0.569
PBAL39_20630
Ankyrin (216 aa)
     
    0.561
PBAL39_10291
Ankyrin repeat domain protein (405 aa)
     
    0.561
PBAL39_10286
Ankyrin (450 aa)
     
    0.561
PBAL39_07410
Ankyrin-like protein (164 aa)
     
    0.561
PBAL39_24163
Short-chain dehydrogenase (271 aa)
   
    0.560
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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