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PBAL39_05088 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_05088" - Short chain dehydrogenase in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_05088Short chain dehydrogenase (269 aa)    
Predicted Functional Partners:
PBAL39_01842
Aldehyde-alcohol dehydrogenase (876 aa)
   
  0.928
PBAL39_05098
Mandelate racemase/muconate lactonizing enzyme-like protein (406 aa)
 
 
  0.901
PBAL39_14494
Transketolase (809 aa)
   
  0.884
PBAL39_04788
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion (658 aa)
   
  0.884
lpxC
UDP-3-O-[R-3-hydroxymyristoyl]-N-acetylglucosamine deacetylase ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis (469 aa)
   
 
  0.861
PBAL39_14934
Putative short-chain dehydrogenase/reductase SDR (249 aa)
 
 
 
0.843
PBAL39_04658
Methionine synthase (1219 aa)
         
  0.837
PBAL39_05083
Uncharacterized protein (780 aa)
              0.829
PBAL39_05078
Uncharacterized protein (838 aa)
              0.829
PBAL39_05093
Sodium/glucose cotransporter 2 (550 aa)
              0.796
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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