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PBAL39_05098 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_05098" - Mandelate racemase/muconate lactonizing enzyme-like protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_05098Mandelate racemase/muconate lactonizing enzyme-like protein (406 aa)    
Predicted Functional Partners:
PBAL39_09521
Amidohydrolase 2 (276 aa)
 
 
    0.930
PBAL39_05088
Short chain dehydrogenase (269 aa)
 
 
  0.901
PBAL39_05103
Uncharacterized protein (394 aa)
              0.850
PBAL39_05093
Sodium/glucose cotransporter 2 (550 aa)
 
          0.844
PBAL39_18514
Short-chain dehydrogenase/reductase SDR (262 aa)
 
 
  0.793
PBAL39_10776
Uncharacterized protein (138 aa)
 
        0.791
PBAL39_05428
Oxidoreductase (254 aa)
 
   
    0.787
PBAL39_06571
Hydrolase, alpha/beta fold superfamily protein (254 aa)
 
 
  0.747
PBAL39_05078
Uncharacterized protein (838 aa)
 
          0.728
PBAL39_01842
Aldehyde-alcohol dehydrogenase (876 aa)
   
 
  0.722
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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