STRINGSTRING
PBAL39_05113 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_05113" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_05113Uncharacterized protein (640 aa)    
Predicted Functional Partners:
PBAL39_05118
Putative outer membrane protein (1070 aa)
 
          0.967
PBAL39_23837
Putative outer membrane protein (1155 aa)
   
          0.778
PBAL39_20004
Putative outer membrane protein (1160 aa)
   
          0.778
PBAL39_10815
Putative outer membrane protein (1080 aa)
   
          0.778
PBAL39_14389
Putative outer membrane protein (1026 aa)
   
          0.769
PBAL39_06741
Putative outer membrane protein (1021 aa)
   
          0.761
PBAL39_22580
Putative lipoprotein (497 aa)
   
          0.756
PBAL39_18644
Uncharacterized protein (487 aa)
   
          0.752
PBAL39_13140
Uncharacterized protein (504 aa)
   
          0.748
PBAL39_18854
Putative outer membrane protein (1018 aa)
   
          0.746
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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