STRINGSTRING
PBAL39_05148 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_05148" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_05148Uncharacterized protein (1078 aa)    
Predicted Functional Partners:
PBAL39_05153
Putative outer membrane protein (604 aa)
 
          0.961
PBAL39_04413
Putative outer membrane protein (596 aa)
 
          0.848
PBAL39_05158
Uncharacterized protein (278 aa)
 
          0.803
PBAL39_07705
Putative outer membrane protein (553 aa)
 
          0.791
PBAL39_00275
Putative outer membrane protein (559 aa)
   
          0.777
PBAL39_13939
Putative outer membrane protein (565 aa)
   
          0.775
PBAL39_16776
Putative outer membrane protein (516 aa)
   
          0.773
PBAL39_12393
Putative outer membrane protein (508 aa)
   
          0.772
PBAL39_07745
Uncharacterized protein (244 aa)
   
          0.759
PBAL39_00612
Putative outer membrane protein (489 aa)
   
          0.758
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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