STRINGSTRING
PBAL39_05283 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_05283" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_05283Uncharacterized protein (284 aa)    
Predicted Functional Partners:
PBAL39_05288
Probable lipopolysaccharide biosynthesis protein (316 aa)
              0.843
PBAL39_05303
N-acetylneuraminate synthase (357 aa)
 
          0.545
PBAL39_05293
Putative NeuA (229 aa)
 
          0.537
PBAL39_02800
Acyltransferase (378 aa)
   
          0.477
PBAL39_06956
Elongation factor Tu (65 aa)
   
          0.463
PBAL39_00497
Acyltransferase (368 aa)
   
          0.441
PBAL39_05313
UDP-N-acetylglucosamine 4,6-dehydratase UDP-4-dehydro-6-deoxy-2-acetamido-D-glucose 4-reductase (338 aa)
              0.427
PBAL39_05308
dTDP-4-dehydrorhamnose reductase (293 aa)
              0.415
PBAL39_05298
Acetyltransferase (178 aa)
              0.415
PBAL39_00647
Endo-1,4-beta-mannosidase (442 aa)
   
          0.410
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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