STRINGSTRING
PBAL39_05353 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_05353" - Sensory transduction histidine kinase in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_05353Sensory transduction histidine kinase (1069 aa)    
Predicted Functional Partners:
PBAL39_20024
Chemotaxis response regulator (Methyltransferase) (1616 aa)
 
 
0.918
PBAL39_18104
Two-component response regulator (229 aa)
 
  0.908
PBAL39_25570
Sensor for ctr capsule biosynthesis sensor histidine kinase (815 aa)
 
 
0.897
PBAL39_13105
Two-component system response regulator (249 aa)
 
  0.891
PBAL39_10121
Two-component system response regulator (231 aa)
 
  0.889
PBAL39_23352
Two component transcriptional regulator, winged helix family protein (234 aa)
 
  0.887
PBAL39_01577
Response regulator receiver (121 aa)
 
  0.887
PBAL39_06141
Two-component response regulator (227 aa)
 
  0.886
PBAL39_00345
Two-component system sensor histidine kinase/response regulator, hybrid (’one-component system’) (1300 aa)
   
   
  0.885
PBAL39_04109
Two-component system response regulator (232 aa)
 
  0.879
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (2%) [HD]