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PBAL39_05368 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_05368" - Transcriptional regulator, LytR family protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_05368Transcriptional regulator, LytR family protein (340 aa)    
Predicted Functional Partners:
PBAL39_05363
Putative udp-glucose 6-dehydrogenase (438 aa)
              0.648
PBAL39_04338
CHU large protein uncharacterized (3896 aa)
   
          0.450
PBAL39_04973
Tyrosine-protein kinase (801 aa)
         
  0.444
PBAL39_02755
Putative tyrosine-protein kinase in cps region (788 aa)
         
  0.444
PBAL39_01877
Putative tyrosine-protein kinase in cps region (765 aa)
         
  0.444
PBAL39_02765
Capsular polysaccharide biosythesis protein (242 aa)
         
  0.443
PBAL39_02680
Putative EPS related membrane protein (464 aa)
         
  0.429
PBAL39_01917
Glycosyltransferase (196 aa)
         
  0.429
PBAL39_05358
Uncharacterized protein (231 aa)
              0.419
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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