STRINGSTRING
PBAL39_05398 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_05398" - Putative outer membrane protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_05398Putative outer membrane protein (1012 aa)    
Predicted Functional Partners:
PBAL39_05393
Putative outer membrane protein (503 aa)
 
          0.968
PBAL39_15104
Putative outer membrane protein (453 aa)
   
          0.776
PBAL39_18959
Putative outer membrane protein (522 aa)
   
          0.775
PBAL39_07990
Putative outer membrane protein (474 aa)
   
          0.774
PBAL39_12393
Putative outer membrane protein (508 aa)
   
          0.773
PBAL39_20274
Uncharacterized protein (462 aa)
   
          0.769
PBAL39_00090
Uncharacterized protein (481 aa)
   
          0.768
PBAL39_20299
Uncharacterized protein (471 aa)
   
          0.767
PBAL39_13315
Putative outer membrane protein (512 aa)
   
          0.766
PBAL39_21210
Uncharacterized protein (469 aa)
   
          0.765
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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